The kitchen is known for its chile relleno and chipotle shrimp, dishes that have anchored the menu for decades, alongside ceviche and picadillo. A Hacienda Brunch runs as its own menu alongside dinner and cocktails.
Fonda San Miguel marked its 50th anniversary with a cookbook, The Soul of Fonda San Miguel, tracing its history and influence on Mexican restaurants on both sides of the border. Its creators have since opened Tzintzuntzan, a bakery and restaurant serving Mexican baked goods and regional breakfast and lunch dishes.
The restaurant has been named to Eater's Austin essential 38.

